\hypertarget{energy__const_8h}{
\section{H/energy\_\-const.h File Reference}
\label{energy__const_8h}\index{H/energy\_\-const.h@{H/energy\_\-const.h}}
}


energy constants  
Include dependency graph for energy\_\-const.h:This graph shows which files directly or indirectly include this file:\subsection*{Defines}
\begin{DoxyCompactItemize}
\item 
\hypertarget{energy__const_8h_ab1e4a8d82f24ed5db01dde5f25269cf1}{
\#define \hyperlink{energy__const_8h_ab1e4a8d82f24ed5db01dde5f25269cf1}{GASCONST}~1.98717}
\label{energy__const_8h_ab1e4a8d82f24ed5db01dde5f25269cf1}

\begin{DoxyCompactList}\small\item\em The gas constant. \item\end{DoxyCompactList}\item 
\hypertarget{energy__const_8h_a307c72605e3713972b4f4fb2d53ea20e}{
\#define \hyperlink{energy__const_8h_a307c72605e3713972b4f4fb2d53ea20e}{K0}~273.15}
\label{energy__const_8h_a307c72605e3713972b4f4fb2d53ea20e}

\begin{DoxyCompactList}\small\item\em 0 deg Celsius in Kelvin \item\end{DoxyCompactList}\item 
\hypertarget{energy__const_8h_a12c2040f25d8e3a7b9e1c2024c618cb6}{
\#define \hyperlink{energy__const_8h_a12c2040f25d8e3a7b9e1c2024c618cb6}{INF}~(INT\_\-MAX/10)}
\label{energy__const_8h_a12c2040f25d8e3a7b9e1c2024c618cb6}

\begin{DoxyCompactList}\small\item\em Infinity as used in minimization routines. \item\end{DoxyCompactList}\item 
\hypertarget{energy__const_8h_a5064c29ab2d1e20c2304b3c67562774d}{
\#define \hyperlink{energy__const_8h_a5064c29ab2d1e20c2304b3c67562774d}{FORBIDDEN}~9999}
\label{energy__const_8h_a5064c29ab2d1e20c2304b3c67562774d}

\begin{DoxyCompactList}\small\item\em forbidden \item\end{DoxyCompactList}\item 
\hypertarget{energy__const_8h_a96a9822fa134450197dd454b1478a193}{
\#define \hyperlink{energy__const_8h_a96a9822fa134450197dd454b1478a193}{BONUS}~10000}
\label{energy__const_8h_a96a9822fa134450197dd454b1478a193}

\begin{DoxyCompactList}\small\item\em bonus contribution \item\end{DoxyCompactList}\item 
\hypertarget{energy__const_8h_a5e75221c779d618eab81e096f37e32ce}{
\#define \hyperlink{energy__const_8h_a5e75221c779d618eab81e096f37e32ce}{NBPAIRS}~7}
\label{energy__const_8h_a5e75221c779d618eab81e096f37e32ce}

\begin{DoxyCompactList}\small\item\em The number of distinguishable base pairs. \item\end{DoxyCompactList}\item 
\hypertarget{energy__const_8h_ae646250fd59311356c7e5722a81c3a96}{
\#define \hyperlink{energy__const_8h_ae646250fd59311356c7e5722a81c3a96}{TURN}~3}
\label{energy__const_8h_ae646250fd59311356c7e5722a81c3a96}

\begin{DoxyCompactList}\small\item\em The minimum loop length. \item\end{DoxyCompactList}\item 
\hypertarget{energy__const_8h_ad1bd6eabac419670ddd3c9ed82145988}{
\#define \hyperlink{energy__const_8h_ad1bd6eabac419670ddd3c9ed82145988}{MAXLOOP}~30}
\label{energy__const_8h_ad1bd6eabac419670ddd3c9ed82145988}

\begin{DoxyCompactList}\small\item\em The maximum loop length. \item\end{DoxyCompactList}\end{DoxyCompactItemize}


\subsection{Detailed Description}
energy constants 